Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015892085.1_cds_XP_016446984.1_41790
CDS Infomation

[gene=LOC107772014] [db_xref=GeneID:107772014] [protein=1-aminocyclopropane-1-carboxylate synthase-like] [protein_id=XP_016446984.1] [location=join(37855..38022,38553..38684,38983..39143,39834..40833)] [gbkey=CDS]
Sequence

ATGGGATTTATTTCTGGCAATAATAAACTTCTTTCAAAAATAGCAACAAGTGATGGACAT
GGTGAAAACTCAGCATATTTTGATGGTTGGAAAGCTTATGAAAATGATCCTTTTCATCTA
ATAAAAAACCCTAATGGTGTTATTCAGATGGGTTTGGCTGAAAATCAGCTTTGTTTTGAT
TTAATTCAAGAATGGGTAGTCAACAACCCAAAAGCCTCCATTTGCACAGCTGAAGGAGCT
CAAGATTTCAAGGATATAGCTATTTTTCAAGACTATCATGGTTTGCCAGAATTTAGAAAG
GCAGTTTCAAGATTTATGGAAAAAGTGAGAGGAGACAAAGTCACATTTGATCCAGATCAC
ATTGTTATGAGTGGAGGGGCAACTGGAGCTCATGAAACTCTAGCATTTTGTTTGGCTGAT
CCTGGTGATGCATTTTTGGTTCCAACACCATATTATCCAGGATTTGATAGAGATTTGAGG
TGGAGAACTGGAGTGCAACTATTTCCTGTTGTTTGTGAGAGTTCAAACAATTTCAAGATC
ACAAAAGAAGCCTTAGAATCTGCATATGAAAAAGCTCAAGAATCAAATATCAGAATAAAA
GGCTTACTTATAAACAATCCATCAAATCCATTAGGCACAGTCTTGGACAGGGAAACATTA
AAAGACATACTAAGTTTCATCAATGACAAAAACATCCACTTAGTATGCGACGAAATCTAC
GCTGCAACGGTCTTTAGCCAGCCCGATTTCATCAGTATATCCGAAGTAATGCAGGAAGTT
AATGGATGCAATGAAAATTTGGTACATATTGTTTATAGCCTGTCGAAAGATTTGGGATTC
CCTGGATTCAGAGTCGGGATTATTTACTCATACAACAACGTAGTGGTGAATTGTGCTAGA
AAAATGTCAAGTTTTGGACTCGTTTCAACACAAACGCAATTCTTGATTGCTTCCATGCTA
TCGGATGAGATTTTCGTTGAAAATTTCATCGCGAAGAGCTCAGTGAGATTGTCACAAAGG
CATGGTTTGTTCACTAAGGGATTAGCACAAGTTGGAATTTGTACATTGAAGAGTAATGGT
GGATTATTTTTTTGGATGGATTTGAGAAGATTACTTAAAGAGTCAACATTTGAAGCTGAA
TTGGATCTTTGGCATATAATTATAAATGAAGTTAAACTCAATGTTTCACCTGGTGTTTCA
TTTCATTGTTCTGAGCCTGGTTGGTTTAGAGTTTGTTTTGCTAATATGGATGATGAAACT
ATGAGAGTTGCATTGAGAAGAATTAGACATTTTGTGCTACAAAGAAAGGGATTAATTGAA
GTTGCTACCAAGAAACAATGTAGAAGGAGCAAACTTGAAATTAGTTTATCATTTAGAAGA
TTGGATGATTTCATGAACTCTCCTTTCATGAATTCTCCTCACTCTCCAATGTCTTCTCCT
ATGGTCCAGGCGAGGACTTAA

Peptide Sequence

PEP ID

XP_016446984.1
PEP Infomation

PREDICTED: 1-aminocyclopropane-1-carboxylate synthase-like [Nicotiana tabacum]
Sequence

MGFISGNNKLLSKIATSDGHGENSAYFDGWKAYENDPFHLIKNPNGVIQMGLAENQLCFD
LIQEWVVNNPKASICTAEGAQDFKDIAIFQDYHGLPEFRKAVSRFMEKVRGDKVTFDPDH
IVMSGGATGAHETLAFCLADPGDAFLVPTPYYPGFDRDLRWRTGVQLFPVVCESSNNFKI
TKEALESAYEKAQESNIRIKGLLINNPSNPLGTVLDRETLKDILSFINDKNIHLVCDEIY
AATVFSQPDFISISEVMQEVNGCNENLVHIVYSLSKDLGFPGFRVGIIYSYNNVVVNCAR
KMSSFGLVSTQTQFLIASMLSDEIFVENFIAKSSVRLSQRHGLFTKGLAQVGICTLKSNG
GLFFWMDLRRLLKESTFEAELDLWHIIINEVKLNVSPGVSFHCSEPGWFRVCFANMDDET
MRVALRRIRHFVLQRKGLIEVATKKQCRRSKLEISLSFRRLDDFMNSPFMNSPHSPMSSP
MVQART

Transcript Sequence

Gene sequence data has not been registered.